PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06774.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family CPP
Protein Properties Length: 200aa    MW: 22428.7 Da    PI: 9.3791
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06774.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR31.63.2e-105777424
                             TCR  4 kgCnCkkskClkkYCeCfaag 24
                                    ++CnCkks ClkkYC+C++  
  Zmw_sc06774.1.g00020.1.sm.mkhc 57 RKCNCKKSGCLKKYCDCYQGV 77
                                    79****************965 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036386.4E-75776IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MGTGARAAVA RSPSASSSIA CVFPLAHIVL NHVDANLVTT SLDKELPLRS PMDIFRRKCN  60
CKKSGCLKKY CDCYQGVQST VSARIVRTRL GEKETQVGVE IQTMNGHLYP KPLTQVRPES  120
SSFQLTRRPG EEVRGEQWHF SRKPSEDGIS DAMEGHNVIK FQRNNKKPER HMDRFSIPRC  180
IEVMNAMSEL SLIEKSLAPD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004963115.12e-64PREDICTED: protein tesmin/TSO1-like CXC 7
TrEMBLK3Z6R92e-64K3Z6R9_SETIT; Uncharacterized protein
STRINGSi022238m6e-64(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP96102834